Genus: Grablovirus


Genus: Grablovirus

Distinguishing features

The monopartite 3.2 kb genome of grapevine red blotch virus is significantly larger than those of other monopartite geminiviruses, which range from 2.7 to 3.0 kb. Its genomic organization is unlike that of other geminiviruses, with virion and complementary sense ORFs that have no homologues in members of the other genera in the family.

Virion

See discussion under family description.

Genome organization and replication

The genome of grapevine red blotch virus has three ORFs in the virion sense strand (V1, V2, and V3) and three in the complementary sense strand (C1, C2, and C3) (Figure 1.Grablovirus). By analogy with mastreviruses, the C1 and C2 ORFs likely encode the replication-associated protein (Rep) from a spliced transcript, and RepA is encoded from the unspliced C1 transcript (Krenz et al., 2014). C3 is entirely embedded in the C1 ORF in the same reading frame. Based on its position in the genome and sequence identity with other geminiviruses, the V1 ORF is predicted to encode the grablovirus coat protein. Likewise, by analogy with other geminiviruses, the V2 and V3 ORFs may encode movement proteins (Sudarshana et al., 2015). Grabloviruses have the v-ori nonanucleotide motif TAATATTAC.

Figure 1.Grablovirus. Genomic organization of grabloviruses. ORFs are denoted as being encoded on the virion-sense (V) or complementary-sense (C) strand, and corresponding protein products are indicated where these are known. The position of the stem-loop containing the conserved TAATATTAC sequence located in the large intergenic region (LIR) is shown. An intron (open box) is predicted to occur at the overlap between ORFs C1 and C2. CP, coat protein; MP, movement protein; Rep, replication-associated protein; SIR, short intergenic region.

Biology

Host range

Grapevine red blotch virus is known to infect only Vitis vinifera (grapevine).

Transmission

The three-cornered alfalfa treehopper, Spissistilus festinus (Hemiptera: Membracidae), was shown to be capable of both acquiring the virus from infected grapevines and transmitting the virus to grapevines in the laboratory (Bahder et al., 2016).

Species demarcation criteria

Nucleotide sequence identity: isolates sharing <80% genome-wide pairwise identity with members of accepted grablovirus species should be classified as members of distinct species. This is a tentative species demarcation criterion that will need to be reassessed as additional grablovirus sequences become available.

Member species

SpeciesVirus name(s)Exemplar isolateExemplar accession numberExemplar RefSeq numberAvailable sequenceOther isolatesOther isolate accession numbersVirus Abbreviation(s)Isolate Abbreviation
Grapevine red blotch virusGrapevine red blotch virus456]17NOV2010/2010JQ901105Complete genomeGRBVUS/JRT(456)17NOV10/10

Virus names, the choice of exemplar isolates, and virus abbreviations, are not official ICTV designations.
Download GenBank/EMBL query for sequences listed in the table here.