References: Potyviridae

References: Potyviridae

Adams, M. J., Antoniw, J. F. & Beaudoin, F. (2005a). Overview and analysis of the polyprotein cleavage sites in the family Potyviridae. Mol Plant Pathol 6, 471-487. [PubMed]

Adams, M. J., Antoniw, J. F. & Fauquet, C. M. (2005b). Molecular criteria for genus and species discrimination within the family Potyviridae. Arch Virol 150, 459-479. [PubMed]

Chung, B. Y., Miller, W. A., Atkins, J. F. & Firth, A. E. (2008). An overlapping essential gene in the Potyviridae. Proceedings of the National Academy of Sciences, USA 105, 5897-5902. [PubMed]

French, R. & Stenger, D. C. (2005). Genome sequences of Agropyron mosaic virus and Hordeum mosaic virus support reciprocal monophyly of the genera Potyvirus and Rymovirus in the family Potyviridae. Arch Virol 150, 299-312. [PubMed]

Gibbs, A. & Ohshima, K. (2010). Potyviruses and the digital revolution. Annu Rev Phytopathol 48, 205-223. [PubMed]

Kekarainen, T., Savilahti, H. & Valkonen, J. P. (2002). Functional genomics on potato virus A: virus genome-wide map of sites essential for virus propagation. Genome Res 12, 584-594. [PubMed]

Kumar, S., Stecher, G. & Tamura, K. (2016). MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datasets. Mol Biol Evol 33, 1870-1874. [PubMed]

Larkin, M. A., Blackshields, G., Brown, N. P., Chenna, R., McGettigan, P. A., McWilliam, H., Valentin, F., Wallace, I. M., Wilm, A., Lopez, R., Thompson, J. D., Gibson, T. J. & Higgins, D. G. (2007). Clustal W and Clustal X version 2.0. Bioinformatics 23, 2947-2948. [PubMed]

Li, W., Hilf, M. E., Webb, S. E., Baker, C. A. & Adkins, S. (2008). Presence of P1b and absence of HC-Pro in Squash vein yellowing virus suggests a general feature of the genus Ipomovirus in the family Potyviridae. Virus Res 135, 213-219. [PubMed]

Olspert, A., Chung, B. Y., Atkins, J. F., Carr, J. P. & Firth, A. E. (2015). Transcriptional slippage in the positive-sense RNA virus family Potyviridae. EMBO Rep 16, 995-1004. [PubMed]

Rodamilans, B., Valli, A., Mingot, A., San Leon, D., Baulcombe, D., Lopez-Moya, J. J. & Garcia, J. A. (2015). RNA polymerase slippage as a mechanism for the production of frameshift gene products in plant viruses of the Potyviridae family. J Virol 89, 6965-6967. [PubMed]

Shukla, D. D. & Ward, C. W. (1989). Structure of potyvirus coat proteins and its application in the taxonomy of the potyvirus group. Adv Virus Res 36, 273-314. [PubMed]

Susaimuthu, J., Tzanetakis, I. E., Gergerich, R. C. & Martin, R. R. (2008). A member of a new genus in the Potyviridae infects Rubus. Virus Res 131, 145-151. [PubMed]

Tatineni, S., Qu, F., Li, R., Morris, T. J. & French, R. (2012). Triticum mosaic poacevirus enlists P1 rather than HC-Pro to suppress RNA silencing-mediated host defense. Virology 433, 104-115. [PubMed]

Valli, A., Lopez-Moya, J. J. & Garcia, J. A. (2007). Recombination and gene duplication in the evolutionary diversification of P1 proteins in the family Potyviridae. J Gen Virol 88, 1016-1028. [PubMed]

Wei, T. & Wang, A. (2008). Biogenesis of cytoplasmic membranous vesicles for plant potyvirus replication occurs at endoplasmic reticulum exit sites in a COPI- and COPII-dependent manner. J Virol 82, 12252-12264. [PubMed]

Winter, S., Koerbler, M., Stein, B., Pietruszka, A., Paape, M. & Butgereitt, A. (2010). Analysis of cassava brown streak viruses reveals the presence of distinct virus species causing cassava brown streak disease in East Africa. J Gen Virol 91, 1365-1372. [PubMed]

Wylie, S. J., Tan, A. J., Li, H., Dixon, K. W. & Jones, M. G. (2012). Caladenia virus A, an unusual new member of the family Potyviridae from terrestrial orchids in Western Australia. Arch Virol 157, 2447-2452. [PubMed]

You, Y. & Shirako, Y. (2010). Bymovirus reverse genetics: requirements for RNA2-encoded proteins in systemic infection. Mol Plant Pathol 11, 383-394. [PubMed]