Genus: Botrexvirus

Genus: Botrexvirus

Distinguishing features

Viruses belonging to the single species in the genus infect a filamentous fungus. The virus genome lacks the triple gene block ORFs characteristic of plant-infecting members of the family (Howitt et al., 2006).

Virion

Morphology

Virions are flexuous filaments of 720 nm modal length and about 13 nm in diameter. 

Physicochemical and physical properties

No information.

Nucleic acid

Virions of Botrytis virus X (BotVX) contain a single molecule of linear single-stranded RNA of 6966 nt, excluding the 3′-poly(A) tail.

Proteins

The only structural protein of BotVX is the capsid protein composed of 400 aa (43 kDa).

Carbohydrates

None reported.

Genome organization and replication

The BotVX genomic RNA contains five putative ORFs on the positive strand, a 5′-UTR of 95 nt and a 3′-UTR of 149 nt, followed by a poly(A) tail (Figure 1.Botrexvirus). ORF1 encodes the 158 kDa replication-associated (Rep) protein, ORF3 encodes the 44 kDa capsid protein (CP) and the functions of the other predicted proteins (ORF2, 30 kDa; ORF4, 14 kDa and ORF5, 14 kDa) are unknown.

Figure 1.Botrexvirus. Genome organization of Botrytis virus X showing the relative positions of the ORFs and their expression products. Mtr, methyltransferase; Hel, helicase; RdRP, RNA-directed RNA polymerase; CP, capsid protein.

Biology

BotVX was discovered infecting an isolate of the plant pathogenic fungus Botrytis cinerea. Its mode of transmission is unknown. The same fungal isolate was also infected with a virus now classified in the species Botrytis virus F (genus Mycoflexivirus, family Gammaflexiviridae).

Derivation of names 

Botrex: from Botrytis virus X,  the type species in the genus

Species demarcation criteria 

Since there is currently only a single species in the genus, species demarcation criteria are not yet defined, but, as delineated for other genera in the family, members of distinct species may have less than 72% nt identity (or 80% aa identity) in their CP or Rep genes. 

Member species

Exemplar isolate of the species
SpeciesVirus nameIsolateAccession numberRefSeq numberAvailable sequenceVirus Abbrev.
Botrytis virus Xbotrytis virus XHowittAY055762NC_005132Complete genomeBotVX

Virus names, the choice of exemplar isolates, and virus abbreviations, are not official ICTV designations.