Genus: Aquamavirus

Distinguishing features

Virion

Morphology

No details are available on the morphology of the virions.

Physicochemical and physical properties

No details are available on physicochemical and physical properties.

Nucleic acid

Length of genome (Kapoor et al., 2008): c. 6,700 nt (5'-UTR: 506 nt, ORF: 6154 nt, 3'-UTR: 34 nt). The 5'-UTR contains a type IV IRES. The location of the cre has not been identified.

Genome organization and replication

Genome layout: VPg+5'UTR^IRES-IVB[1AB-1C-1D-2A1^npgp/2A2-2B-2C/3A-3B1-3B2-3C-3D]3'UTR-poly(A)

The deduced polyprotein has a length of 2,050 amino acids. There is no L protein. 1AB protein remains uncleaved; 2A1 is a short FMDV-like polypeptide (NPG¯P), 2A2 protein has an unknown function. Two copies of 3B are predicted to be present.

Biology

Known natural hosts are pinnipeds (Phoca vitulina, Pusa hispida). Affected animals are apparently healthy.

Member Species

Species	Virus name(s)	Exemplar isolate	Exemplar accession number	Exemplar RefSeq number	Available sequence	Other isolates	Other isolate accession numbers	Virus Abbreviation(s)	Isolate Abbreviation
Aquamavirus A	seal picornavirus	HO-02-21	EU142040	NC_009891	Complete genome			SPV

Virus names, the choice of exemplar isolates, and virus abbreviations, are not official ICTV designations.
Download GenBank/EMBL query for sequences listed in the table here.

Derivation of names

Aquama-: from aquatic mammal