References: Nyamiviridae


References: Nyamiviridae

Bekal, S., Domier, L. L., Niblack, T. L. & Lambert, K. N. (2011). Discovery and initial analysis of novel viral genomes in the soybean cyst nematode. J Gen Virol 92, 1870-1879. [PubMed]

Guindon, S., Dufayard, J. F., Lefort, V., Anisimova, M., Hordijk, W. & Gascuel, O. (2010). New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol 59, 307-321. [PubMed]

Herrel, M., Hoefs, N., Staeheli, P. & Schneider, U. (2012). Tick-borne Nyamanini virus replicates in the nucleus and exhibits unusual genome and matrix protein properties. J Virol 86, 10739-10747. [PubMed]

Katoh, K., Rozewicki, J. & Yamada, K. D. (2017). MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Brief Bioinform 10.1093/bib/bbx108. [PubMed]

Kuhn, J. H., Bekal, S., Cai, Y., Clawson, A. N., Domier, L. L., Herrel, M., Jahrling, P. B., Kondo, H., Lambert, K. N., Mihindukulasuriya, K. A., Nowotny, N., Radoshitzky, S. R., Schneider, U., Staeheli, P., Suzuki, N., Tesh, R. B., Wang, D., Wang, L. F. & Dietzgen, R. G. (2013). Nyamiviridae: proposal for a new family in the order Mononegavirales. Arch Virol 158, 2209-2226. [PubMed]

Li, C. X., Shi, M., Tian, J. H., Lin, X. D., Kang, Y. J., Chen, L. J., Qin, X. C., Xu, J., Holmes, E. C. & Zhang, Y. Z. (2015). Unprecedented genomic diversity of RNA viruses in arthropods reveals the ancestry of negative-sense RNA viruses. Elife 4, e05378. [PubMed]

Mihindukulasuriya, K. A., Nguyen, N. L., Wu, G., Huang, H. V., da Rosa, A. P., Popov, V. L., Tesh, R. B. & Wang, D. (2009). Nyamanini and Midway viruses define a novel taxon of RNA viruses in the order Mononegavirales. J Virol 83, 5109-5116. [PubMed]

Rogers, M. B., Cui, L., Fitch, A., Popov, V., Travassos da Rosa, A. P., Vasilakis, N., Tesh, R. B. & Ghedin, E. (2014). Whole genome analysis of Sierra Nevada virus, a novel mononegavirus in the family Nyamiviridae. Am J Trop Med Hyg 91, 159-164. [PubMed] 

Shi, M., Lin, X.-D., Tian, J.-H., Chen, L.-J., Chen, X., Li, C.-X., Qin, X.-C., Li, J., Cao, J.-P., Eden, J.-S., Buchmann, J., Wang, W., Xu, J., Holmes, E. C. & Zhang, Y.-Z. (2016). Redefining the invertebrate RNA virosphere. Nature 540, 539-543. [PubMed]

Takahashi, M., Yunker, C. E., Clifford, C. M., Nakano, W., Fujino, N., Tanifuji, K. & Thomas, L. A. (1982). Isolation and characterization of Midway virus: a new tick-borne virus related to Nyamanini. J Med Virol 10, 181-193. [PubMed] 

Talavera, G. & Castresana, J. (2007). Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments. Syst Biol 56, 564-577. [PubMed]