Genus: Dyokappapapillomavirus


Genus: Dyokappapapillomavirus

Distinguishing features

Members of this genus are associated with the skin lesions of ungulates.

Virion

Morphology

See discussion under family description. 

Physicochemical and physical properties

See discussion under family description.

Nucleic acid

See discussion under family description.

Proteins

See discussion under family description.

Lipids

See discussion under family description.

Carbohydrates

See discussion under family description.

Genome organization and replication

See discussion under family description.

Antigenicity

See discussion under family description.

Biology

See discussion under family description.

Species demarcation criteria

Putative novel papillomavirus genome with complete genome sequence data available and that is <70% related to papillomaviruses within the genus (Figure 1.Dyokappapapillomavirus).

Figure 1.Dyokappapapillomavirus. Phylogenetic tree of members of the genus Dyokappapapillomavirus. The E1, E2, L2, and L1 nucleotide sequences of 343 papillomavirus isolates including representatives of all species and genera within the Papillomaviridae family were aligned as amino acid sequences using MUSCLE v7.221 (Edgar 2004). JModeltest2 (Darriba et al., 2012) was used to determine the optimal model of evolution (GTR + I + G) for the concatenated nucleotide sequences. Maximum likelihood (ML) trees were constructed using RAxML MPI v8.2.9 (Stamatakis 2006) implementing the GTR substitution model. ML bootstrap analysis used the autoMRE-based stopping criterion in RAxML. Following tree construction (tree available in the Resources section of the Papillomaviridae Report), the subtree corresponding to the genus Dyokappapapillomavirus was isolated. Tips are labelled with virus names and accession numbers; nodes are labelled with bootstrap support values. 

Member Species

SpeciesVirus name(s)Exemplar isolateExemplar accession numberExemplar RefSeq numberAvailable sequenceOther isolatesOther isolate accession numbersVirus Abbreviation(s)Isolate Abbreviation
Dyokappapapillomavirus 1Ovis aries papillomavirus 3FJ796965Complete genomeOaPV3
Dyokappapapillomavirus 2Rupicapra rupicapra papillomavirus 1KC876045NC_023895Complete genomeRrPV1
Dyokappapapillomavirus 3Bos taurus papillomavirus 16KU519391NC_030796Complete genomeBPV16
Dyokappapapillomavirus 4Bos taurus papillomavirus 18KU519393NC_030798Complete genomeBPV18
Dyokappapapillomavirus 5Pudu puda papillomavirus 1KT932713Complete genomePpuPV1

Virus names, the choice of exemplar isolates, and virus abbreviations, are not official ICTV designations.