Distinguishing features
Members of this genus are associated with skin plaques in carnivore hosts.
Virion
See discussion under family description.
Genome organization and replication
See discussion under family description.
Biology
See discussion under family description.
Species demarcation criteria
Putative novel papillomavirus genome with complete genome sequence data available and that is <70% related to papillomaviruses within the genus (Figure 1.Chipapillomavirus).
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Figure 1.Chipapillomavirus. Phylogenetic tree of members of the genus Chipapillomavirus. The E1, E2, L2, and L1 nucleotide sequences of 343 papillomavirus isolates including representatives of all species and genera within the Papillomaviridae family were aligned as amino acid sequences using MUSCLE v7.221 (Edgar 2004). JModeltest2 (Darriba et al., 2012) was used to determine the optimal model of evolution (GTR + I + G) for the concatenated nucleotide sequences. Maximum likelihood (ML) trees were constructed using RAxML MPI v8.2.9 (Stamatakis 2006) implementing the GTR substitution model. ML bootstrap analysis used the autoMRE-based stopping criterion in RAxML. Following tree construction (tree available in the Resources section of the Papillomaviridae Report), the subtree corresponding to the genus Chipapillomavirus was isolated. Tips are labelled with virus names and accession numbers; nodes are labelled with bootstrap support values. |
Member species
Exemplar isolate of the species
Species | Virus name | Isolate | Accession number | RefSeq number | Available sequence | Virus Abbrev. | |
---|---|---|---|---|---|---|---|
Chipapillomavirus 1 | Canis familiaris papillomavirus 3 | DQ295066 | NC_008297 | Complete genome | CPV3 | ||
Chipapillomavirus 1 | Canis familiaris papillomavirus 5 | Birkenfeld | FJ492743 | Complete genome | CPV5 | ||
Chipapillomavirus 1 | Canis familiaris papillomavirus 9 | JF800656 | Complete genome | CPV9 | |||
Chipapillomavirus 1 | Canis familiaris papillomavirus 11 | JF800658 | Complete genome | CPV11 | |||
Chipapillomavirus 1 | Canis familiaris papillomavirus 12 | Deacon C | JQ754321 | Complete genome | CPV12 | ||
Chipapillomavirus 1 | Canis familiaris papillomavirus 18 | Boston 2015 | KT326919 | Complete genome | CPV18 | ||
Chipapillomavirus 1 | Canis familiaris papillomavirus 20 | Ada | KT901797 | Complete genome | CPV20 | ||
Chipapillomavirus 2 | Canis familiaris papillomavirus 4 | pug2006 | EF584537 | NC_010226 | Complete genome | CPV4 | |
Chipapillomavirus 2 | Canis familiaris papillomavirus 16 | Chana | KP099966 | Complete genome | CPV16 | ||
Chipapillomavirus 3 | Canis familiaris papillomavirus 8 | Charlotte | HQ262536 | NC_016014 | Complete genome | CPV8 | |
Chipapillomavirus 3 | Canis familiaris papillomavirus 10 | JF800657 | Complete genome | CPV10 | |||
Chipapillomavirus 3 | Canis familiaris papillomavirus 14 | JQ701802 | Complete genome | CPV14 | |||
Chipapillomavirus 3 | Canis familiaris papillomavirus 15 | Hercules2012 | JX899359 | Complete genome | CPV15 |